The Multiomics Reading Group

Weekly reading groups every Wednesday at 11am ET

About the Multiomics Reading Group

At the crossroads of machine learning (ML) and the biological sciences, the Multiomics Reading Group explores the next frontier of foundation models (FMs) for multi-omics. Our mission is twofold:

  1. ML Perspective: We dive into cutting-edge advances in FMs and downstream tasks—offering practical tips and real-world insights (what worked, what didn’t, and the hidden pitfalls).

  2. Biology Perspective: We expand fundamental biological knowledge, highlight emerging data sources, and discuss real-world applications of FMs, from health and disease contexts to novel research directions.

Topics We Cover:

  • Tokenization, model design, pre-training and fine-tuning algorithms for genomics, transcriptomics, proteomics, and beyond

  • Single-omics to multi-omics data integration

  • Downstream tasks and evaluations with real-world applications in mind

Hosted by: César Miguel Valdez Córdova and Xinyu Yuan

Latest Recordings